Type |
Details |
Score |
GO Term |
Description: |
The process whose specific outcome is the progression of the gynoecium over time, from its formation to the mature structure. The gynoecium is the collective name for the carpels of a flower. |
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Protein Domain |
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Gene |
Length: |
1538
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Chromosome Location: |
Chr3: 19660488-19662025 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
Ribosomal protein L24e family protein;(source:Araport11) |
TAIR Curator Summary: |
RPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20. |
TAIR Short Description: |
Ribosomal protein L24e family protein |
TAIR Aliases: |
RPL24, RPL24B, STV1 |
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Gene |
Length: |
2394
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Chromosome Location: |
Chr5: 3611247-3613640 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
Flavin-binding monooxygenase family protein;(source:Araport11) |
TAIR Curator Summary: |
Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase. YUC4 is part of a pathway linking auxin biosynthesis and gynoecium development. It is expressed in the stigma and the apical meristem and is ethylene inducible. |
TAIR Short Description: |
Flavin-binding monooxygenase family protein |
TAIR Aliases: |
AtYUC4, YUC4 |
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Gene |
Length: |
1266
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Chromosome Location: |
Chr5: 26765992-26767257 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11) |
TAIR Curator Summary: |
Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development and acts as a local modulator of auxin and cytokinin responses to control gynoecium development. HEC1 affects auxin transport by acting as a transcriptional regulator of PIN1 and PIN3. Inhibits thermomorphogenesis. |
TAIR Short Description: |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
TAIR Aliases: |
HEC1 |
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Publication |
First Author: |
Nemhauser JL |
Title: |
Auxin and ETTIN in Arabidopsis gynoecium morphogenesis. |
Year: |
2000 |
Journal: |
Development |
Volume: |
127 |
Pages: |
3877-88 |
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Publication |
First Author: |
Bowman JL |
Title: |
Molecular genetics of gynoecium development in Arabidopsis. |
Year: |
1999 |
Journal: |
Curr Top Dev Biol |
Volume: |
45 |
Pages: |
155-205 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
AS1 patterns the Arabidopsis gynoecium by repressing BP. |
Organism: |
A. thaliana |
Gene: |
AS1 |
PubMed Id: |
17592013 |
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Publication |
First Author: |
Chen C |
Title: |
LEUNIG has multiple functions in gynoecium development in Arabidopsis. |
Year: |
2000 |
Journal: |
Genesis |
Volume: |
26 |
Pages: |
42-54 |
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Gene |
Length: |
1827
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Chromosome Location: |
Chr3: 5109782-5111608 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein;(source:Araport11) |
TAIR Curator Summary: |
Encodes a transcription factor involved in shoot apical meristem formation and cotyledon separation. Functions redundantly with CUC2 and CUC3. The cuc1 cuc2 double mutant phenotype is first detectable at the heart stage, as embryos lacking two distinct bulges of cotyledonary primordia.In post embryonic development it plays a role in axillary meristem formation, boundary separation, gynoecium and ovule development.Contains a MIR164 binding site. |
TAIR Short Description: |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
TAIR Aliases: |
ANAC054, ATNAC1, CUC1 |
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Publication |
First Author: |
Sessions RA |
Title: |
Arabidopsis gynoecium structure in the wild and in ettin mutants. |
Year: |
1995 |
Journal: |
Development |
Volume: |
121 |
Pages: |
1519-32 |
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Publication |
First Author: |
Liu Z |
Title: |
Regulation of gynoecium marginal tissue formation by LEUNIG and AINTEGUMENTA. |
Year: |
2000 |
Journal: |
Plant Cell |
Volume: |
12 |
Pages: |
1879-92 |
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Publication |
First Author: |
Schuster C |
Title: |
Arabidopsis HECATE genes function in phytohormone control during gynoecium development. |
Year: |
2015 |
Journal: |
Development |
Volume: |
142 |
Pages: |
3343-50 |
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Gene |
Length: |
1792
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Chromosome Location: |
Chr1: 26007350-26009141 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
Plant-specific transcription factor YABBY family protein;(source:Araport11) |
TAIR Curator Summary: |
Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region. CRC targets YABBY genes such as YUC4 in gynoecium development. |
TAIR Short Description: |
Plant-specific transcription factor YABBY family protein |
TAIR Aliases: |
CRC |
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GeneRIF (Gene Reference into Function) |
Annotation: |
SPATULA (SPT) regulates gynoecium development by activating genes involved in shade avoidance. |
Organism: |
A. thaliana |
Gene: |
SPT |
PubMed Id: |
22851763 |
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Publication |
First Author: |
Xing S |
Title: |
SPL8 and miR156-targeted SPL genes redundantly regulate Arabidopsis gynoecium differential patterning. |
Year: |
2013 |
Journal: |
Plant J |
Volume: |
75 |
Pages: |
566-77 |
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Publication |
First Author: |
Roe JL |
Title: |
TOUSLED participates in apical tissue formation during gynoecium development in Arabidopsis. |
Year: |
1997 |
Journal: |
Plant Cell |
Volume: |
9 |
Pages: |
335-53 |
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Publication |
First Author: |
Colombo M |
Title: |
A new role for the SHATTERPROOF genes during Arabidopsis gynoecium development. |
Year: |
2010 |
Journal: |
Dev Biol |
Volume: |
337 |
Pages: |
294-302 |
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Publication |
First Author: |
Lucero LE |
Title: |
TCP15 modulates cytokinin and auxin responses during gynoecium development in Arabidopsis. |
Year: |
2015 |
Journal: |
Plant J |
Volume: |
84 |
Pages: |
267-82 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
Two Auxin Response Elements Fine-Tune PINOID Expression During Gynoecium Development in Arabidopsis thaliana. |
Organism: |
A. thaliana |
Gene: |
PID |
PubMed Id: |
31557840 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
Two Auxin Response Elements Fine-Tune PINOID Expression During Gynoecium Development in Arabidopsis thaliana. |
Organism: |
A. thaliana |
Gene: |
IND |
PubMed Id: |
31557840 |
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Publication |
First Author: |
Herrera-Ubaldo H |
Title: |
The protein-protein interaction landscape of transcription factors during gynoecium development in Arabidopsis. |
Year: |
2023 |
Journal: |
Mol Plant |
Volume: |
16 |
Pages: |
260-278 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
Data show that phytochrome B regulates gynoecium formation in association with the transcription factor SPATULA. |
Organism: |
A. thaliana |
Gene: |
PHYB |
PubMed Id: |
21364315 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
Data show that phytochrome B regulates gynoecium formation in association with the transcription factor SPATULA. |
Organism: |
A. thaliana |
Gene: |
SPT |
PubMed Id: |
21364315 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
SPL8 and miR156-targeted SPL genes control gynoecium patterning through interference with auxin homeostasis and signalling. |
Organism: |
A. thaliana |
Gene: |
SPL8 |
PubMed Id: |
23621152 |
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Publication |
First Author: |
Kuusk S |
Title: |
STY1 and STY2 promote the formation of apical tissues during Arabidopsis gynoecium development. |
Year: |
2002 |
Journal: |
Development |
Volume: |
129 |
Pages: |
4707-17 |
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Publication |
First Author: |
Kuusk S |
Title: |
Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner. |
Year: |
2006 |
Journal: |
Plant J |
Volume: |
47 |
Pages: |
99-111 |
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Publication |
First Author: |
Ripoll JJ |
Title: |
PEPPER, a novel K-homology domain gene, regulates vegetative and gynoecium development in Arabidopsis. |
Year: |
2006 |
Journal: |
Dev Biol |
Volume: |
289 |
Pages: |
346-59 |
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Publication |
First Author: |
Nole-Wilson S |
Title: |
Polar auxin transport together with aintegumenta and revoluta coordinate early Arabidopsis gynoecium development. |
Year: |
2010 |
Journal: |
Dev Biol |
Volume: |
346 |
Pages: |
181-95 |
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Publication |
First Author: |
Azhakanandam S |
Title: |
SEUSS and AINTEGUMENTA mediate patterning and ovule initiation during gynoecium medial domain development. |
Year: |
2008 |
Journal: |
Plant Physiol |
Volume: |
146 |
Pages: |
1165-81 |
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Publication |
First Author: |
Ishida T |
Title: |
Involvement of CUP-SHAPED COTYLEDON genes in gynoecium and ovule development in Arabidopsis thaliana. |
Year: |
2000 |
Journal: |
Plant Cell Physiol |
Volume: |
41 |
Pages: |
60-7 |
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Publication |
First Author: |
Moubayidin L |
Title: |
Dynamic control of auxin distribution imposes a bilateral-to-radial symmetry switch during gynoecium development. |
Year: |
2014 |
Journal: |
Curr Biol |
Volume: |
24 |
Pages: |
2743-8 |
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Publication |
First Author: |
Andres-Robin A |
Title: |
Evidence for the Regulation of Gynoecium Morphogenesis by ETTIN via Cell Wall Dynamics. |
Year: |
2018 |
Journal: |
Plant Physiol |
Volume: |
178 |
Pages: |
1222-1232 |
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Publication |
First Author: |
Kuhn A |
Title: |
Two Auxin Response Elements Fine-Tune PINOID Expression During Gynoecium Development in Arabidopsis thaliana. |
Year: |
2019 |
Journal: |
Biomolecules |
Volume: |
9 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
HEC1 acts as a local modulator of auxin and cytokinin responses to control gynoecium development in Arabidopsis. |
Organism: |
A. thaliana |
Gene: |
HEC1 |
PubMed Id: |
26293302 |
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Publication |
First Author: |
Nishimura T |
Title: |
The Arabidopsis STV1 protein, responsible for translation reinitiation, is required for auxin-mediated gynoecium patterning. |
Year: |
2005 |
Journal: |
Plant Cell |
Volume: |
17 |
Pages: |
2940-53 |
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Publication |
First Author: |
Dornelas MC |
Title: |
Arabidopsis thaliana SHAGGY-related protein kinases (AtSK11 and 12) function in perianth and gynoecium development. |
Year: |
2000 |
Journal: |
Plant J |
Volume: |
21 |
Pages: |
419-29 |
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Publication |
First Author: |
Pires HR |
Title: |
ULTRAPETALA trxG genes interact with KANADI transcription factor genes to regulate Arabidopsis gynoecium patterning. |
Year: |
2014 |
Journal: |
Plant Cell |
Volume: |
26 |
Pages: |
4345-61 |
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Publication |
First Author: |
Kamiuchi Y |
Title: |
The CUC1 and CUC2 genes promote carpel margin meristem formation during Arabidopsis gynoecium development. |
Year: |
2014 |
Journal: |
Front Plant Sci |
Volume: |
5 |
Pages: |
165 |
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Publication |
First Author: |
Poulios S |
Title: |
Synergistic action of GCN5 and CLAVATA1 in the regulation of gynoecium development in Arabidopsis thaliana. |
Year: |
2018 |
Journal: |
New Phytol |
Volume: |
220 |
Pages: |
593-608 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
SPT and IND at least partially mediate their joint functions in gynoecium and fruit development by controlling auxin distribution. |
Organism: |
A. thaliana |
Gene: |
IND |
PubMed Id: |
21990939 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
SPT and IND at least partially mediate their joint functions in gynoecium and fruit development by controlling auxin distribution. |
Organism: |
A. thaliana |
Gene: |
SPT |
PubMed Id: |
21990939 |
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Protein Domain |
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Publication |
First Author: |
Nishimura T |
Title: |
A key factor of translation reinitiation, ribosomal protein L24, is involved in gynoecium development in Arabidopsis. |
Year: |
2004 |
Journal: |
Biochem Soc Trans |
Volume: |
32 |
Pages: |
611-3 |
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Publication |
First Author: |
Flanagan CA |
Title: |
Specific expression of the AGL1 MADS-box gene suggests regulatory functions in Arabidopsis gynoecium and ovule development. |
Year: |
1996 |
Journal: |
Plant J |
Volume: |
10 |
Pages: |
343-53 |
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Gene |
Length: |
3773
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Chromosome Location: |
Chr2: 14325206-14328978 |
Organism . Short Name: |
A. thaliana |
TAIR Computational Description: |
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein;(source:Araport11) |
TAIR Curator Summary: |
ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. ETT is also a target of AP2; integrateing the functions of AGAMOUS and APETALA2 in floral meristem determinacy. Positive regulation of drought stress response genes. |
TAIR Short Description: |
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related |
TAIR Aliases: |
ARF3, ETT |
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Interaction Experiment |
Name: |
Pires HR (2014) |
Description: |
ULTRAPETALA trxG genes interact with KANADI transcription factor genes to regulate Arabidopsis gynoecium patterning. |
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Publication |
First Author: |
Trehin C |
Title: |
QUIRKY interacts with STRUBBELIG and PAL OF QUIRKY to regulate cell growth anisotropy during Arabidopsis gynoecium development. |
Year: |
2013 |
Journal: |
Development |
Volume: |
140 |
Pages: |
4807-17 |
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Publication |
First Author: |
Groszmann M |
Title: |
SPATULA and ALCATRAZ, are partially redundant, functionally diverging bHLH genes required for Arabidopsis gynoecium and fruit development. |
Year: |
2011 |
Journal: |
Plant J |
Volume: |
68 |
Pages: |
816-29 |
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Publication |
First Author: |
Foreman J |
Title: |
Shedding light on flower development: phytochrome B regulates gynoecium formation in association with the transcription factor SPATULA. |
Year: |
2011 |
Journal: |
Plant Signal Behav |
Volume: |
6 |
Pages: |
471-6 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
STY1 and related genes promote normal development of the style and affect apical-basal patterning of the gynoecium through regulation of auxin homeostasis. |
Organism: |
A. thaliana |
Gene: |
STY1 |
PubMed Id: |
16740145 |
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Publication |
First Author: |
Nole-Wilson S |
Title: |
Synergistic disruptions in seuss cyp85A2 double mutants reveal a role for brassinolide synthesis during gynoecium and ovule development. |
Year: |
2010 |
Journal: |
BMC Plant Biol |
Volume: |
10 |
Pages: |
198 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
ETT controls the elongation of the valve tissues of the gynoecium through the positive regulation of pectin methylesterase (PME) activity in the cell wall. |
Organism: |
A. thaliana |
Gene: |
ETT |
PubMed Id: |
30237208 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
SLK1 shares redundant function with SEU during gynoecium and ovule development. SEU and SLK1 are required for optimal auxin signaling during root and gynoecial development. |
Organism: |
A. thaliana |
Gene: |
SLK1 |
PubMed Id: |
20007451 |
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Interaction Experiment |
Name: |
Groszmann M (2011) |
Description: |
SPATULA and ALCATRAZ, are partially redundant, functionally diverging bHLH genes required for Arabidopsis gynoecium and fruit development. |
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Interaction Experiment |
Name: |
Trehin C (2013) |
Description: |
QUIRKY interacts with STRUBBELIG and PAL OF QUIRKY to regulate cell growth anisotropy during Arabidopsis gynoecium development. |
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Publication |
First Author: |
Zúñiga-Mayo VM |
Title: |
The class II HD-ZIP JAIBA gene is involved in meristematic activity and important for gynoecium and fruit development in Arabidopsis. |
Year: |
2012 |
Journal: |
Plant Signal Behav |
Volume: |
7 |
Pages: |
1501-3 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
The feed-forward YUC4 activation by AG and CRC directs a precise change in chromatin state for the shift from floral stem cell maintenance to gynoecium formation. |
Organism: |
A. thaliana |
Gene: |
AG |
PubMed Id: |
30538233 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
The feed-forward YUC4 activation by AG and CRC directs a precise change in chromatin state for the shift from floral stem cell maintenance to gynoecium formation. |
Organism: |
A. thaliana |
Gene: |
YUC4 |
PubMed Id: |
30538233 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
The feed-forward YUC4 activation by AG and CRC directs a precise change in chromatin state for the shift from floral stem cell maintenance to gynoecium formation. |
Organism: |
A. thaliana |
Gene: |
CRC |
PubMed Id: |
30538233 |
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Publication |
First Author: |
Orashakova S |
Title: |
The CRABS CLAW ortholog from California poppy (Eschscholzia californica, Papaveraceae), EcCRC, is involved in floral meristem termination, gynoecium differentiation and ovule initiation. |
Year: |
2009 |
Journal: |
Plant J |
Volume: |
58 |
Pages: |
682-93 |
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Publication |
First Author: |
Zúñiga-Mayo VM |
Title: |
JAIBA, a class-II HD-ZIP transcription factor involved in the regulation of meristematic activity, and important for correct gynoecium and fruit development in Arabidopsis. |
Year: |
2012 |
Journal: |
Plant J |
Volume: |
71 |
Pages: |
314-26 |
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GeneRIF (Gene Reference into Function) |
Annotation: |
The JAB gene regulates meristematic activity in different tissues, and that it is necessary for the correct formation of the gynoecium at different stages, contributing to a crucial process in plant life: proper fruit development. |
Organism: |
A. thaliana |
Gene: |
HAT1 |
PubMed Id: |
22409594 |
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UniProt Feature |
Begin: |
129 |
Description: |
In crc-7; abnormal gynoecium and lack of nectaries. |
Type: |
mutagenesis site |
End: |
129 |
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Protein Domain |
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