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Search results 1 to 47 out of 47 for Polycistronic tRNA-gRNA

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Hits by Organism

Type Details Score
Gene
AT5G36170 | locus:2158936 | HCF109 | high chlorophyll fluorescent 109
Length: 2238  
Chromosome Location: Chr5: 14235835-14238072
Organism . Short Name: A. thaliana
TAIR Computational Description: high chlorophyll fluorescent 109;(source:Araport11)
TAIR Curator Summary: Required for normal processing of polycistronic plastidial transcripts
TAIR Short Description: high chlorophyll fluorescent 109
TAIR Aliases: ATPRFB, HCF109
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SO Term
SO:0000634 | polycistronic_mRNA
Description: An mRNA that encodes multiple proteins from at least two non-overlapping regions.
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SO Term
SO:0000078 | polycistronic_transcript
Description: A transcript that is polycistronic.
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Ontology Term Synonym
Ontology Term Synonym
Name: polycistronic mRNA
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: polycistronic transcript
Type: synonym
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SO Term
SO:0000631 | polycistronic_primary_transcript
Description: A primary transcript encoding for more than one gene product.
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Ontology Term Synonym
Ontology Term Synonym
Name: polycistronic primary transcript
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: polycistronic processed transcript
Type: synonym
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SO Term
SO:0000242 | untranslated_region_polycistronic_mRNA
Description: The untranslated sequence separating the 'cistrons' of multicistronic mRNA.
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SO Term
SO:0000690 | gene_with_polycistronic_transcript
Description: A gene that encodes a polycistronic transcript.
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Ontology Term Synonym
Ontology Term Synonym
Name: untranslated region polycistronic mRNA
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: gene with polycistronic transcript
Type: synonym
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GO Term
GO:0031426 | polycistronic mRNA processing
Description: The conversion of a primary mRNA transcript containing more than one complete protein-coding region into individual mature mRNA molecules.
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GO Term
GO:0140040 | mitochondrial polycistronic RNA processing
Description: The conversion of polycistronic RNA transcribed from a mitochondrial genome into mono- or bi-cistronic RNAs.
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Publication
3926949
First Author: Fort P
Title: Nucleotide sequence and complementation analysis of a polycistronic sporulation operon, spoVA, in Bacillus subtilis.
Year: 1985
Journal: J Gen Microbiol
Volume: 131
Pages: 1091-105
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Protein Domain
IPR004922
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Protein Domain
IPR002608
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Protein Domain
IPR007893
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Gene
AT3G17040 | locus:2086132 | HCF107 | high chlorophyll fluorescent 107
Length: 4115  
Chromosome Location: Chr3: 5808666-5812780
Organism . Short Name: A. thaliana
TAIR Computational Description: high chlorophyll fluorescent 107;(source:Araport11)
TAIR Curator Summary: It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. It binds in the psbT?psbH intercistronic region and blocks the progression of 5′ → 3′ exoribonucleases, which defines the 5′ end of processed psbH transcripts and also stabilizes the downstream RNA segment. In addition, HCF107 binding remodels the structure of the psbH 5′ UTR in a way that can account for its ability to enhance psbH translation.
TAIR Short Description: high chlorophyll fluorescent 107
TAIR Aliases: HCF107
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Publication
20215442
First Author: Cliffe LJ
Title: Two thymidine hydroxylases differentially regulate the formation of glucosylated DNA at regions flanking polymerase II polycistronic transcription units throughout the genome of Trypanosoma brucei.
Year: 2010
Journal: Nucleic Acids Res
Volume: 38
Pages: 3923-35
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Protein Domain
IPR003063
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Protein Domain
IPR036528
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Protein Domain
IPR000965
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SO Term
SO:0000880 | polycistronic
Description: An attribute describing a sequence that contains the code for more than one gene product.
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Protein Domain
IPR028366
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SO Term
SO:0000722 | gene_with_dicistronic_mRNA
Description: A gene that encodes a polycistronic mRNA.
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Protein Domain
IPR043967
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Protein Domain
IPR043966
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Protein Domain
IPR043965
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Protein Domain
IPR044863
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UniProt Feature
UniProt Feature
Begin: 505
Description: In pgr3-2; Affects the accumulation of the petL polycistronic RNA.
Type: mutagenesis site
End: 505
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UniProt Feature
UniProt Feature
Begin: 610
Description: In pgr3-1; Affects the accumulation of the petL polycistronic RNA.
Type: mutagenesis site
End: 610
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Protein Domain
IPR000657
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SO Term
SO:0000241 | internal_UTR
Description: A UTR bordered by the terminal and initial codons of two CDSs in a polycistronic transcript. Every UTR is either 5', 3' or internal.
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GO Term
GO:0002106 | endonucleolytic cleaveage between SSU-rRNA and LSU-rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
Description: Endonucleolytic cleavages between the SSU-rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. These cleavages liberate tRNAs from the polycistronic transcript as well as separating the SSU and LSU containing transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.
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SO Term
SO:0000709 | SL2_acceptor_site
Description: A trans_splicing_acceptor_site which appends the 22nt SL2 RNA leader sequence to the 5' end of mRNAs. SL2 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001748 | SL3_acceptor_site
Description: A SL2_acceptor_site which appends the SL3 RNA leader sequence to the 5' end of an mRNA. SL3 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001749 | SL4_acceptor_site
Description: A SL2_acceptor_site which appends the SL4 RNA leader sequence to the 5' end of an mRNA. SL4 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001750 | SL5_acceptor_site
Description: A SL2_acceptor_site which appends the SL5 RNA leader sequence to the 5' end of an mRNA. SL5 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001751 | SL6_acceptor_site
Description: A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001752 | SL7_acceptor_site
Description: A SL2_acceptor_site which appends the SL7 RNA leader sequence to the 5' end of an mRNA. SL7 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001753 | SL8_acceptor_site
Description: A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001754 | SL9_acceptor_site
Description: A SL2_acceptor_site which appends the SL9 RNA leader sequence to the 5' end of an mRNA. SL9 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001755 | SL10_acceptor_site
Description: A SL2_acceptor_site which appends the SL10 RNA leader sequence to the 5' end of an mRNA. SL10 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001756 | SL11_acceptor_site
Description: A SL2_acceptor_site which appends the SL11 RNA leader sequence to the 5' end of an mRNA. SL11 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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SO Term
SO:0001757 | SL12_acceptor_site
Description: A SL2_acceptor_site which appends the SL12 RNA leader sequence to the 5' end of an mRNA. SL12 acceptor sites occur in genes in internal segments of polycistronic transcripts.
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GO Term
GO:0001181 | RNA polymerase I general transcription initiation factor activity
Description: A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase I. Factors required for RNA polymerase I transcription initiation include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3. In all species characterized, RNA polymerase I transcribes a large polycistronic transcript that is processed into several mature rRNAs (3 or 4 depending on the species), including the large subunit rRNA (28S in humans), the small subunit rRNA (18S in humans), as well as one or two additional smaller rRNAs (the 5.8S rRNA in humans). In most species, this large rRNA transcript is the sole product of RNA polymerase I. However there are rare exceptions, such as Trypanosoma brucei, where RNA polymerase I also transcribes certain mRNAs.
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