RNA-seq read datasets used in Araport11

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SRA Accession Read Length (bp) Sequencing Layout (SE/PE) Tissues Description Aligned reads (millions) % Reads aligned BAM file
BAM index file
ERR274310 76 SE aerial Aerial part of long-day-grown 4-leaf-stage seedling with mock NaCl treatment 29.1 96.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/ERR274310/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/ERR274310/accepted_hits.bam.bai
SRR547531 100 SE aerial Aerial part of 4-week-old plant 11.07 93.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR547531/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR547531/accepted_hits.bam.bai
SRR548277 100 SE aerial Aerial part of 4-week-old plant 10.65 88.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR548277/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR548277/accepted_hits.bam.bai
SRR847503 75 SE aerial Aerial part of 3-week-old soil-grown plant 19.01 86.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847503/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847503/accepted_hits.bam.bai
SRR847504 75 SE aerial Aerial part of 3-week-old soil-grown plant 17.65 83.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847504/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847504/accepted_hits.bam.bai
SRR847505 75 SE aerial Aerial part of 3-week-old soil-grown plant 14.55 88.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847505/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847505/accepted_hits.bam.bai
SRR847506 75 SE aerial Aerial part of 3-week-old soil-grown plant 17.38 88.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847506/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/aerial/SRR847506/accepted_hits.bam.bai
SRR1207194 50 SE carpel Carpels collected manually from stage 8-13 flowers 41.3 98.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/carpel/SRR1207194/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/carpel/SRR1207194/accepted_hits.bam.bai
SRR1207195 50 SE carpel Carpels collected manually from stage 8-13 flowers 39.07 98.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/carpel/SRR1207195/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/carpel/SRR1207195/accepted_hits.bam.bai
SRR1019436 101 SE dark 5-day-old etiolated seedling 22.14 95.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1019436/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1019436/accepted_hits.bam.bai
SRR1019437 101 SE dark 5-day-old etiolated seedling 24.16 95.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1019437/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1019437/accepted_hits.bam.bai
SRR1049784 36 SE dark 7-day-old dark-grown seedling 51.67 94.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1049784/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR1049784/accepted_hits.bam.bai
SRR477075 36 SE dark 5-day-old dark-grown seedling 33.57 98.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR477075/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR477075/accepted_hits.bam.bai
SRR477076 36 SE dark 5-day-old dark-grown seedling 20.2 98.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR477076/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR477076/accepted_hits.bam.bai
SRR493237 100 SE dark 3-day-old etiolated seedling 27.04 97.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR493237/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR493237/accepted_hits.bam.bai
SRR493238 100 SE dark 3-day-old etiolated seedling 25.7 96.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR493238/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/dark/SRR493238/accepted_hits.bam.bai
SRR314815 82 SE flower stage-12 floral buds from long-day grown plant 25.51 93.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR314815/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR314815/accepted_hits.bam.bai
SRR800753 78 SE flower stage-12 floral bud 7.51 96.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR800753/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR800753/accepted_hits.bam.bai
SRR800754 78 SE flower stage-12 floral bud 7.06 96 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR800754/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/flower/SRR800754/accepted_hits.bam.bai
SRR1105822 76 PE leaf Leaf of 3-week-old long-day-grown plant 38.48 99 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1105822/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1105822/accepted_hits.bam.bai
SRR1105823 76 PE leaf Leaf of 3-week-old long-day-grown plant 30.58 97.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1105823/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1105823/accepted_hits.bam.bai
SRR1159821 50 SE leaf Leaf of 20-day-old plant 19.34 98.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159821/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159821/accepted_hits.bam.bai
SRR1159827 51 SE leaf Leaf of 20-day-old plant 9.14 98.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159827/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159827/accepted_hits.bam.bai
SRR1159837 51 SE leaf Leaf of 20-day-old plant 5.66 98.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159837/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR1159837/accepted_hits.bam.bai
SRR314813 82 SE leaf Leaf of 11-day-old plant 26.04 93.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR314813/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR314813/accepted_hits.bam.bai
SRR446027 75 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 1h post-infiltration 31.48 96.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446027/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446027/accepted_hits.bam.bai
SRR446028 101 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 1h post-infiltration 42.23 81.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446028/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446028/accepted_hits.bam.bai
SRR446033 75 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 6h post-infiltration 61.48 89.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446033/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446033/accepted_hits.bam.bai
SRR446034 76 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 6h post-infiltration 63.39 92.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446034/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446034/accepted_hits.bam.bai
SRR446039 75 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 12h post-infiltration 60.33 85.5 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446039/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446039/accepted_hits.bam.bai
SRR446040 76 PE leaf Leaf of 6-week-old short-day-grown plant infiltrated with mock virulent bacterium and harvested 12h post-infiltration 74.68 93.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446040/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446040/accepted_hits.bam.bai
SRR446484 76 SE leaf Non-dividing tissues oldest 4-6 leaves of 4-week-old short-day-grown plant 30.58 90.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446484/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446484/accepted_hits.bam.bai
SRR446485 76 SE leaf Dividing tissues meristem and younger leaves of 4-week-old short-day-grown plant 35.23 91.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446485/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446485/accepted_hits.bam.bai
SRR446486 76 SE leaf Non-dividing tissues oldest 4-6 leaves of 4-week-old short-day-grown plant 31.08 91.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446486/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446486/accepted_hits.bam.bai
SRR446487 76 SE leaf Dividing tissues meristem and younger leaves of 4-week-old short-day-grown plant 35 92.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446487/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR446487/accepted_hits.bam.bai
SRR493036 50 SE leaf Leaf of 2-week-old plant 21.04 97.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493036/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493036/accepted_hits.bam.bai
SRR493097 42 SE leaf Leaf of 5-week-old short-day-grown plant 31.98 60.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493097/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493097/accepted_hits.bam.bai
SRR493098 40 SE leaf Leaf of 5-week-old short-day-grown plant 13.41 82.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493098/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493098/accepted_hits.bam.bai
SRR493101 44 SE leaf Leaf of 5-week-old short-day-grown plant 7.68 77.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493101/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR493101/accepted_hits.bam.bai
SRR764885 95 PE leaf Leaf of 4-week-old long-day-grwon plant 50.38 98.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR764885/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR764885/accepted_hits.bam.bai
SRR924656 76 SE leaf Leaf of 3-week-old plant 39.59 96.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR924656/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR924656/accepted_hits.bam.bai
SRR934391 101 PE leaf Leaf of 2-week-old long-day-grwon plant 36.2 84.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR934391/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR934391/accepted_hits.bam.bai
SRR942022 50 SE leaf Leaf of 3-week-old long-day-grwon plant 17.98 98 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR942022/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/leaf/SRR942022/accepted_hits.bam.bai
SRR070570 41 SE light 4-day-old 24h-light-grown seedling 8.79 95.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR070570/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR070570/accepted_hits.bam.bai
SRR070571 42 SE light 4-day-old 24h-light-grown seedling 8.59 95.5 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR070571/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR070571/accepted_hits.bam.bai
SRR1001909 50 SE light 10-day-old long-day plate-grown seedling 8.17 97.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1001909/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1001909/accepted_hits.bam.bai
SRR1001910 50 SE light 10-day-old long-day plate-grown seedling 13.7 97.5 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1001910/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1001910/accepted_hits.bam.bai
SRR1019221 90 PE light 15-d-old long-day plate-grown seedling 49.46 96.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1019221/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR1019221/accepted_hits.bam.bai
SRR345561 41 SE light 7-day-old plate-grown long-day seedlings 17.84 84.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR345561/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR345561/accepted_hits.bam.bai
SRR345562 42 SE light 7-day-old plate-grown long-day seedlings 13.63 85.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR345562/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR345562/accepted_hits.bam.bai
SRR346552 50 SE light 7-day-old plate-grown long-day seedlings 19.2 98.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR346552/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR346552/accepted_hits.bam.bai
SRR346553 50 SE light 7-day-old plate-grown long-day seedlings 23.72 97 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR346553/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR346553/accepted_hits.bam.bai
SRR394082 50 SE light 10-day-old long-day plate-grown seedling 46.28 98.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR394082/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR394082/accepted_hits.bam.bai
SRR504179 55 SE light 2-week-old long-day seedling 25.51 96.5 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504179/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504179/accepted_hits.bam.bai
SRR504180 48 SE light 2-week-old long-day seedling 21.12 93.5 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504180/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504180/accepted_hits.bam.bai
SRR504181 48 SE light 2-week-old long-day seedling 37.24 97.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504181/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR504181/accepted_hits.bam.bai
SRR515073 36 SE light 7-day-old plate-grown, long-day-grown seedling 5.2 94.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR515073/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR515073/accepted_hits.bam.bai
SRR515074 36 SE light 7-day-old plate-grown, long-day-grown seedling 4.53 94.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR515074/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR515074/accepted_hits.bam.bai
SRR527164 36 SE light 7-day-old, plate-grown, long-day-grown seedling 19.99 97 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR527164/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR527164/accepted_hits.bam.bai
SRR527165 36 SE light 7-day-old, plate-grown, long-day-grown seedling 19.92 96.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR527165/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR527165/accepted_hits.bam.bai
SRR584115 101 SE light 11-day-old light-grown plate-grown seedling 25.1 96.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584115/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584115/accepted_hits.bam.bai
SRR584121 101 SE light 11-day-old light-grown plate-grown seedling 39.24 96 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584121/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584121/accepted_hits.bam.bai
SRR584129 80 SE light 11-day-old light-grown plate-grown seedling 41.36 98.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584129/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584129/accepted_hits.bam.bai
SRR584134 101 SE light 11-day-old light-grown plate-grown seedling 40.45 97.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584134/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR584134/accepted_hits.bam.bai
SRR653555 100 SE light 9 day-old 24h-light-grown seedling 13.57 96.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653555/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653555/accepted_hits.bam.bai
SRR653556 100 SE light 9 day-old 24h-light-grown seedling 16.15 96.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653556/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653556/accepted_hits.bam.bai
SRR653557 100 SE light 9 day-old 24h-light-grown seedling 13.56 97 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653557/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653557/accepted_hits.bam.bai
SRR653561 100 SE light 9 day-old long-day-grown seedling harvested 2h after light on on the 9th day 10.24 96.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653561/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653561/accepted_hits.bam.bai
SRR653562 100 SE light 9 day-old long-day-grown seedling harvested 2h after light on on the 9th day 15.92 95 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653562/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653562/accepted_hits.bam.bai
SRR653563 100 SE light 9 day-old long-day-grown seedling harvested 2h after light on on the 9th day 8.82 95 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653563/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653563/accepted_hits.bam.bai
SRR653564 100 SE light 9 day-old long-day-grown seedling harvested 6h after light on on the 9th day 11.8 96.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653564/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653564/accepted_hits.bam.bai
SRR653565 100 SE light 9 day-old long-day-grown seedling harvested 6h after light on on the 9th day 11.62 97.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653565/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653565/accepted_hits.bam.bai
SRR653566 100 SE light 9 day-old long-day-grown seedling harvested 6h after light on on the 9th day 10.25 97.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653566/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653566/accepted_hits.bam.bai
SRR653567 100 SE light 9 day-old long-day-grown seedling harvested 10h after light on on the 9th day 10.75 97 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653567/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653567/accepted_hits.bam.bai
SRR653568 100 SE light 9 day-old long-day-grown seedling harvested 10h after light on on the 9th day 9.06 96.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653568/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653568/accepted_hits.bam.bai
SRR653569 100 SE light 9 day-old long-day-grown seedling harvested 10h after light on on the 9th day 14.32 97.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653569/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653569/accepted_hits.bam.bai
SRR653570 100 SE light 9 day-old long-day-grown seedling harvested 14h after light on on the 9th day 9.66 96.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653570/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653570/accepted_hits.bam.bai
SRR653571 100 SE light 9 day-old long-day-grown seedling harvested 14h after light on on the 9th day 10.81 96.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653571/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653571/accepted_hits.bam.bai
SRR653572 100 SE light 9 day-old long-day-grown seedling harvested 14h after light on on the 9th day 8.85 94.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653572/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653572/accepted_hits.bam.bai
SRR653573 100 SE light 9 day-old long-day-grown seedling harvested 18h after light on on the 9th day 10.56 97 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653573/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653573/accepted_hits.bam.bai
SRR653574 100 SE light 9 day-old long-day-grown seedling harvested 18h after light on on the 9th day 11.13 96.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653574/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653574/accepted_hits.bam.bai
SRR653575 100 SE light 9 day-old long-day-grown seedling harvested 18h after light on on the 9th day 10.92 95.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653575/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653575/accepted_hits.bam.bai
SRR653576 100 SE light 9 day-old long-day-grown seedling harvested 22h after light on on the 9th day 12.64 95 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653576/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653576/accepted_hits.bam.bai
SRR653577 100 SE light 9 day-old long-day-grown seedling harvested 22h after light on on the 9th day 9.78 97.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653577/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653577/accepted_hits.bam.bai
SRR653578 100 SE light 9 day-old long-day-grown seedling harvested 22h after light on on the 9th day 12.2 95.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653578/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR653578/accepted_hits.bam.bai
SRR797194 50 SE light 10-day-olde plate-grown 24-light-grown seedling with mock cytokinin treatment 54.05 98.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR797194/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR797194/accepted_hits.bam.bai
SRR797230 50 SE light 10-day-olde plate-grown 24-light-grown seedling with mock cytokinin treatment 51.42 98.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR797230/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR797230/accepted_hits.bam.bai
SRR833246 50 SE light 10-day-olde plate-grown 24-light-grown seedling with mock cytokinin treatment 57.08 98.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR833246/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/light/SRR833246/accepted_hits.bam.bai
SRR847501 75 SE pollen Mature pollen 21.9 86.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/pollen/SRR847501/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/pollen/SRR847501/accepted_hits.bam.bai
SRR847502 75 SE pollen Mature pollen 20.63 87.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/pollen/SRR847502/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/pollen/SRR847502/accepted_hits.bam.bai
SRR1260032 50 SE RAM Root tip from 3-day-old seedling 41.36 95.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1260032/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1260032/accepted_hits.bam.bai
SRR1260033 51 SE RAM Root tip from 3-day-old seedling 38.88 88.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1260033/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1260033/accepted_hits.bam.bai
SRR1261509 101 PE RAM Root tip about 4 mm from 4-day-old seedling 46.75 96.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1261509/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/RAM/SRR1261509/accepted_hits.bam.bai
SRR401413 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 13.37 84.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401413/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401413/accepted_hits.bam.bai
SRR401414 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 9.54 86.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401414/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401414/accepted_hits.bam.bai
SRR401415 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 15.78 87.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401415/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401415/accepted_hits.bam.bai
SRR401416 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 16.56 85.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401416/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401416/accepted_hits.bam.bai
SRR401417 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 11.95 86.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401417/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401417/accepted_hits.bam.bai
SRR401418 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 19.98 87.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401418/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401418/accepted_hits.bam.bai
SRR401419 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 13.27 84.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401419/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401419/accepted_hits.bam.bai
SRR401420 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 9.41 86.3 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401420/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401420/accepted_hits.bam.bai
SRR401421 100 SE receptacle Receptacle from base of stage 15 flower of long-day-grown plant 15.71 87.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401421/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/receptacle/SRR401421/accepted_hits.bam.bai
ERR274309 76 SE root Root from 4-leaf-stage seedling with mock NaCl treatment 29.19 95 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/ERR274309/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/ERR274309/accepted_hits.bam.bai
SRR1046909 102 SE root Root from 10-day-old seedling 5.25 82.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1046909/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1046909/accepted_hits.bam.bai
SRR1046910 78 SE root Root from 10-day-old seedling 5.37 93.6 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1046910/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1046910/accepted_hits.bam.bai
SRR1524935 101 SE root Root from 10-day-old plate-grown 24h-light-grown seedling transferred to iron sufficient agar plant for 3 days 21.86 95.7 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524935/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524935/accepted_hits.bam.bai
SRR1524938 101 SE root Root from 10-day-old plate-grown 24h-light-grown seedling transferred to iron sufficient agar plant for 3 days 16.76 95.1 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524938/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524938/accepted_hits.bam.bai
SRR1524940 101 SE root Root from 10-day-old plate-grown 24h-light-grown seedling transferred to iron sufficient agar plant for 3 days 14.69 93.8 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524940/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR1524940/accepted_hits.bam.bai
SRR314814 82 SE root Root from 11-day-old seedling 23.37 85 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR314814/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/root/SRR314814/accepted_hits.bam.bai
SRR949956 36 SE SAM Shoot apical meristem/young leaf from 14-day-old plant grown in simulated sun condition 4.54 96.4 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949956/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949956/accepted_hits.bam.bai
SRR949965 36 SE SAM Shoot apical meristem/young leaf from 14-day-old plant grown in simulated sun condition 3.98 97.2 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949965/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949965/accepted_hits.bam.bai
SRR949988 36 SE SAM Shoot apical meristem/young leaf from 14-day-old plant grown in simulated sun condition 4.96 97.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949988/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949988/accepted_hits.bam.bai
SRR949989 36 SE SAM Shoot apical meristem/young leaf from 14-day-old plant grown in simulated sun condition 4.72 97.9 https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949989/accepted_hits.bam
https://de.iplantcollaborative.org/anon-files/iplant/home/araport/rnaseq_bam/SAM/SRR949989/accepted_hits.bam.bai