ThaleMine 1.9.1 Release

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ThaleMine was updated to version 1.9.1 on June 21 2016. ThaleMine is available at https://apps.araport.org/thalemine/

JBrowse was updated on June 21 2016. JBrowse is available at https://apps.araport.org/jbrowse/?data=arabidopsis

Release Notes

Major Changes

  • ThaleMine 1.9.1 includes the following updated datasets:
    • Araport11 Official Release (06/2016) gene structure and functional annotation for the Col-0 genome generated by Araport (accepted by NCBI) [MINE-1196]
    • Homolog data from Panther DB, restricted only to orthologs from Human and Yeast and paralogs from Arabidopsis thaliana [MINE-1223]
    • For more detailed information about datasets available via ThaleMine, please see: https://www.araport.org/thalemine/data-statistics
  • JBrowse added/updated the following new datasets:
    • Araport11 Official Release (06/2016) gene structure and functional annotation for the Col-0 genome generated by Araport (accepted by NCBI) [MINE-1196]
    • For more detailed information about datasets available via JBrowse, please see: https://www.araport.org/jbrowse/data-statistics

Minor Changes

  • On ThaleMine gene report pages, external Friendly Mine links to HumanMine and YeastMine have been reinstated [FEED-1110, MINE-1227]
  • On ThaleMine report pages, the FASTA sequence of the Pseudogene feature is now correctly reported [MINE-1225]